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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015932427.1_cds_XP_016478957.1_70543
CDS Infomation

[gene=LOC107800314] [db_xref=GeneID:107800314] [protein=rust resistance kinase Lr10-like isoform X3] [protein_id=XP_016478957.1] [location=complement(join(31767..32908,33374..33403,33516..33548,33707..33784,34202..34505))] [gbkey=CDS]
Sequence

ATGTCTGGAGGAACCAAGTTTCTTTCAGTTCTTACAATTCTCATCTTCTTGCAGCTCTCT
GACACCCCATTTGCCGAACAGAACCAGCAGTGTGCACCTTCTAGTTGTGGGCATATTAAG
AACATCAGCTACCCCTTTCGATTGAAAAATGACCCAAAGCATTGTGGCGACGAAAAGTAT
GAATTGAGCTGTGAAGGGAATCGCCCCATATTCACCATGTTTATGACAAATTGGAATGGG
TCCCTGAACTACTATGTGCAAGCCATCAATTATGATAACTCCACTATCCGCCTTGTAGAT
CCTGGTGAAAATTCAAGGGATGTTCGCTGTGTGGATTACACCTGCAAGGTTTACAATTTT
AGATTCTTCAAAACCGTATGTGTTACTCAAAGACATGTTCTCCGTGTTCTTGAAAGCTTC
ATTCCATGGATACTTCCCATATTTGGGGTTAGTGCTGTGGCAAGAATCGTACTACTCCCA
TGCATATTTGTGTTTCTAGTGATTGAATTACGAAGAAGGCATTTGTCGATCTTTGATGCA
ATTGAAAGTTTCCTACATAGTAGAAACAATTTCATGCCCATTCGATACCCGTACTCCAGC
ATAAGGAAGATGACTAGGAATTTCAAAGAGAAACTAGGCCAAGGAGGTTATGGTTCAGTA
TATAAAGGCAAGCTTCAAAGTGGTCCTAATGTGGCAGTGAAGATCTTGACCAAGCCCAAA
GCTGATGGGCAAGACTTCATCAACGAGGTTGCCACAATCGGAAGGATTCATCATGTTAAC
GTGGTACAACTTATTGGCTATTGTGCTGAGAGATCTAAACGTGCCCTCGTATATGACTTC
ATGCCTAATGGATCACTTGACAAGTACATCACACCCCGAGAAGGAGGAACTCTACTTAGC
TGGCAAAGAAAGTCTGAAATTGCTCTTGGAGTTGCTCGAGGTATTGAATATTTGCATCGA
GGTTGTGACATACAAATTCTACATTTTGACATCAAGCCGCACAACATACTTTTGGATGAA
AATTTCGTTCCAAAAATTTCTGACTTTGGTCTTGCTAAATTATACCCCACGGATAACAGC
ATTGTTACTCTAACAGCAGCAAGGGGAACAATCGGATATGTAGCTCCAGAACTCATCAAC
AGAAGCATTGGTCCTATATCTTATAAGGCAGATGTTTATAGCTTTGGAATGTTACTGATT
GAGATAGCAGGTATGAAAGGAAACTCGGCAGCAAGAGAGGATATGTCAAGCCAGTATTTT
CCACATTGGATCTATGATCAATTCGACAAGGAAAAGGAAATTGAAGTACTAGACGAGACG
CATGATGATGAAATGATCATAAAGAAGCTAACTTTAGTTGCTTTGTGGTGCATACAAATG
AATCCACTCGATCGTCCGTCAATGACTAAAGTAGTTGAAATGCTTGAAGGTGAATTACAG
GCTTTGCAAACGCCTCCTAGGCCTTTTGAATCACTGCAACCATCTCCGTTGGAATTCAAT
CTGAGTTCTTCACTAGGTTCAACTGAGTCTATGATTTTGGTTGAGAATTGTTCTGATTCT
GCAAAAGTAGATGTAATTATAGGTTGA

Peptide Sequence

PEP ID

XP_016478957.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like isoform X3 [Nicotiana tabacum]
Sequence

MSGGTKFLSVLTILIFLQLSDTPFAEQNQQCAPSSCGHIKNISYPFRLKNDPKHCGDEKY
ELSCEGNRPIFTMFMTNWNGSLNYYVQAINYDNSTIRLVDPGENSRDVRCVDYTCKVYNF
RFFKTVCVTQRHVLRVLESFIPWILPIFGVSAVARIVLLPCIFVFLVIELRRRHLSIFDA
IESFLHSRNNFMPIRYPYSSIRKMTRNFKEKLGQGGYGSVYKGKLQSGPNVAVKILTKPK
ADGQDFINEVATIGRIHHVNVVQLIGYCAERSKRALVYDFMPNGSLDKYITPREGGTLLS
WQRKSEIALGVARGIEYLHRGCDIQILHFDIKPHNILLDENFVPKISDFGLAKLYPTDNS
IVTLTAARGTIGYVAPELINRSIGPISYKADVYSFGMLLIEIAGMKGNSAAREDMSSQYF
PHWIYDQFDKEKEIEVLDETHDDEMIIKKLTLVALWCIQMNPLDRPSMTKVVEMLEGELQ
ALQTPPRPFESLQPSPLEFNLSSSLGSTESMILVENCSDSAKVDVIIG

Transcript Sequence

Gene sequence data has not been registered.